Source code for mml.core.visualization.cm

# LICENSE HEADER MANAGED BY add-license-header
#
# SPDX-FileCopyrightText: Copyright 2024 German Cancer Research Center (DKFZ) and contributors.
# SPDX-License-Identifier: MIT
#

import itertools
from typing import List

import matplotlib.pyplot as plt
import numpy as np
import numpy.typing as npt


[docs] def render_confusion_matrix(cm: npt.NDArray[np.float64], classes: List[str]) -> plt.Figure: """ Returns a matplotlib figure containing the plotted confusion matrix. :param ~np.ndarray cm: the n by n confusion matrix with integer entries :param List[str] classes: list of class names (same order as in the axes of the cm) :return: matplotlib figure rendered the cm """ # plot background on true counts (interpretable from color bar) fig = plt.figure(figsize=(8, 8)) plt.imshow(cm, interpolation="nearest", cmap=plt.cm.Blues) plt.title("Confusion matrix") plt.colorbar() # name rows and columns tick_marks = np.arange(len(classes)) plt.xticks(tick_marks, classes, rotation=45) plt.yticks(tick_marks, classes) # normalize each row (true class) and print relative values into cm cells cm = np.around(cm.astype("float") / cm.sum(axis=1)[:, np.newaxis], decimals=2) for i, j in itertools.product(range(cm.shape[0]), range(cm.shape[1])): plt.text(j, i, cm[i, j], horizontalalignment="center", color="red") # name axes plt.ylabel("True label") plt.xlabel("Predicted label") plt.tight_layout() return fig